BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C02LP1|AL425822
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 752 0.0
3x_Contig1471 105 1e-22
>3x_Contig1762
Length = 22098
Score = 752 bits (379), Expect = 0.0
Identities = 387/389 (99%), Gaps = 1/389 (0%)
Strand = Plus / Plus
Query: 411 atggttctactgtgtggaggaagatattgaagtccgactatcttgacgggttgtaagatc 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 atggttctactgtgtggaggaagatattgaagtccgactatcttgacgggttgtaagatc 74
Query: 471 acaaattagaaaagcgttagtgtggaattgctaggaattaaaccttaaatatgaactata 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acaaattagaaaagcgttagtgtggaattgctaggaattaaaccttaaatatgaactata 134
Query: 531 taactgaagatgcacaaagaagtatattgaatagaagggaaaatttaagtacaaatttga 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 taactgaagatgcacaaagaagtatattgaatagaagggaaaatttaagtacaaatttga 194
Query: 591 aaactttgtaattagagtttggtaagatcagtgttcgattagttccgttaaatatccgtg 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaactttgtaattagagtttggtaagatcagtgttcgattagttccgttaaatatccgtg 254
Query: 651 agc-gttctgtgggttttcatcgtaagtvactgacatttcagtgtcatgtgtaccctcat 709
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 255 agcggttctgtgggttttcatcgtaagtaactgacatttcagtgtcatgtgtaccctcat 314
Query: 710 cggtggaagatgacacaaaggatgaatgtagtgatgttgtggaaggcgtctgagactctg 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cggtggaagatgacacaaaggatgaatgtagtgatgttgtggaaggcgtctgagactctg 374
Query: 770 gatctgcaatcgatacaacatattcgtcg 798
|||||||||||||||||||||||||||||
Sbjct: 375 gatctgcaatcgatacaacatattcgtcg 403
>3x_Contig1471
Length = 8032
Score = 105 bits (53), Expect = 1e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 1 agcagcatccaaatcatctgacagttcggtagcagtagtcaacttattagata 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 agcagcatccaaatcatctgacagttcggtagcagtagtcaacttattagata 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5812
Number of Sequences: 1807
Number of extensions: 5812
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 2
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)